Catsalyze, scaffolding technology
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Application 01

Biocatalysis

Our scaffold gathers up to twenty copies of one enzyme, or of several, on a single ring, each oriented and spaced by design. The result: higher activity, better stability and cascades co-localized at a defined ratio, free in solution or on the carrier you already use.

Decameric ring displaying twenty enzyme copies
The object

Up to twenty enzyme copies on one ring

The PRX scaffold
Ten identical subunits, produced by fermentation, self-assemble inside the cells into a 13 nm ring (~300 kDa) with two display positions each. Its size, larger still once loaded, makes it easy to isolate, recover and recycle.
Enzyme copies
Up to twenty copies of one enzyme per ring, or several enzymes on the same ring at a defined ratio, to tune synergy and flux along a cascade.
Genetic linkers
A library of genetic linkers is available. We select the best fit for your enzyme(s): the right distance and flexibility for it to keep its activity.
Enzyme-display strategies
Three strategies: genetic fusion, adapter–ligand binding, and chemical cross-linking. The optimal one is selected based on enzyme properties, specificities, and the requirements of the target biocatalytic application.

Where current approaches fall short

01
Enzymes in solution

Hard to isolate and recycle. In cascades, intermediates diffuse away before reaching the next enzyme, and free enzymes are often less stable.Impact: enzyme used up with every batch, activity lost over time, lower yield.

02
Immobilized Enzymes

Recoverable, reusable and often more stable, but orientation and spacing are poorly controlled, and activity loss, diffusion limits and leaching are common.Impact: innert carrier mass, immobilization cost, activity underused.

03
Whole cells

Substrate is diverted to the host’s metabolism, toxicity limits conversion, and cell survival constrains reaction conditions.Impact: more substrate per kilogram of product, and less room to optimize the process.

What the scaffold changes

Each ring carries up to twenty enzymes, with number, orientation and spacing set by design. The result: higher activity and better stability. The ring’s size also makes the enzyme easy to isolate and recycle, with no carrier at all. If your process already runs on resin, the same ring couples to it, and each unit of resin surface carries more active enzyme.

Higher activity

x 2.5 at equal enzyme quantity, on two unreleated wild-type enzymes.

Improved stability

Activity retained longer than with the free enzyme (lipase).

Organized by design

Orientation and spacing set at the molecular level, not left to chance. Flexible loading depending on the protein display strategy.

Optional carrier

Easy to isolate by size without requiring a carrier, while remaining compatible with your existing resin for immobilization when needed.

Co-localization for cascades

Several enzymes per ring, at a defined ratio and distance, to tune synergies and flux.

Organizing a four-enzyme cascade with the PRX scaffold

Free in solution
Four different enzymes, A to D, drifting apart in solution

Intermediates diffuse away, limiting transfer to the next enzyme.

Co-localized on the ring
Two PRX rings, one carrying enzymes A and B and the other enzymes C and D, with five copies on each face and ten around the rim

Intermediates reach the next enzyme through spatial proximity.

Conventional immobilization

Disordered, randomly mixed and sterically hindered.

Enzymes A to D attached at random to a resin bead, mixed together and in random orientations
Scaffold-mediated immobilization

Organized, accessible and co-localized.

Two PRX rings standing on a resin bead, each carrying a pair of enzymes in a defined arrangement

Measured in our lab

Our own results, on model enzymes. Two unrelated enzymes, one factor: the gain does not appear to depend on one particular enzyme. Activity is compared with the free enzyme at equal enzyme quantity. Full protocols and raw data are available under NDA.

Activity
Lipase B, Candida antarctica and Carbonic anhydrase, Bos taurus

2.5× higher activity of scaffold-displayed enzymes compared with their free counterparts under identical conditions, demonstrated with two enzymes from unrelated families and with distinct catalytic mechanisms.

Stability
Lipase B, Candida antarctica

The displayed lipase also held its activity longer than the free enzyme under the same conditions.

Already immobilizing? Get more from every surface.

Recovering a scaffolded enzyme by size is one option, not the only one. If your plant runs on a packed bed or stirred reactor with a solid carrier, the scaffold binds to resin using standard immobilization chemistry, and the ring’s built-in organization makes that immobilization more effective. We help you choose the right support.

More active sites per anchor point

One attachment point brings up to twenty enzyme copies instead of one, so the same resin surface carries much more catalytic capacity.

Structural control for better immobilization

Sitting between resin and enzyme, the scaffold sets how many enzymes are loaded and how they are oriented and spaced.

Your process, unchanged

Packed bed, stirred tank, membrane reactor or free in solution: the same scaffolded enzyme fits all four, so you keep the format your plant already runs.

Where the business case is strongest

Costly substrates

When raw material dominates the cost, every point of conversion saved money.

Costly enzymes

When every gram of rare or hard-to-make enzymes is recovered and delivers more product, the biocatalytic process becomes viable : higher activity, better stability, more cycles.

Inefficient cascades

When intermediates are labile or toxic, or cofactors must be recycled, co-localizing the enzymes on one scaffold keeps intermediates at high local concentration, raising throughput and steering flux toward the product.

Our first biocatalysis application

Natural vanillin, from ferulic acid

A single enzymatic step from biobased ferulic acid: a cell-free process developed with an industrial partner.

Discover our vanillin process

In the literature

Independent work from other groups on the principles behind our approach: spatial clustering, architectural control and multivalency.

Design of a Programmable and Recyclable Protein Scaffolding Material with Geometrically Precise Enzyme Patterning for Improved Cascade Catalysis
H. Gong, Y. Meng, Y. Sun, et al. Adv. Funct. Mater. 36, no. 20 (2026)

Demonstrates how programmable protein scaffolds can precisely organize enzymes in a cascade, improving proximity, stability, and reusability. Co-immobilization of PETase and MHETase enhanced thermal stability and increased product yield, highlighting the potential of protein scaffolds for efficient and reusable biocatalysis.

Research progress of multi-enzyme complexes based on the design of scaffold protein
Wang, X. S., Liu, H.-L., Yuan, H.-B., Huang, D., & Wang, T.-F. (2023). Bioresources and Bioprocessing, 10.

Protein scaffold design for multienzyme complexes, emphasizing control of inter-enzyme distance, stoichiometry, and in vitro applicability. Modular tags such as SpyTag/SpyCatcher and cohesin-dockerin build defined complexes in vitro, favoring substrate channeling and protecting labile or toxic intermediates.

Research progress on the application of cell-free synthesis systems for enzymatic processes.
Liu, J., Hu, Y., Gu, W., Lan, H., Zhang, Z., Jiang, L.-L., & Xu, X. (2022). Critical Reviews in Biotechnology, 43, 938 - 955.

Reviews cell-free metabolic engineering. Artificial scaffolds improve cascade efficiency by reducing diffusion, decomposition, and loss of intermediates; protein-protein scaffolds being one of the main design modes.

A Versatile Protein Scaffold Engineered for the Hierarchical Assembly of Robust and Highly Active Enzymes
Y. Meng, L. Peplowski, T. Wu, H. Gong, R. Gu, L. Han, Y. Xia, Z. Liu, Z. Zhou, Z. Cheng, A Adv. Sci. 2025, 12, 2500405

Demonstrates how a self-assembling protein scaffold can organize enzymes into higher-order structures, enhancing catalytic activity and stability. Direct scaffold–enzyme fusion increased activity while overcoming the stability–activity trade-off of an industrial enzyme, highlighting the potential of protein scaffolds for robust biocatalysis.

Stuck on a biocatlytic route? Bring it to us.

We assess, under NDA, whether enzyme scaffolding can fix what is holding your biocatalytic route back. If it is not the lever you need, we will tell you plainly.

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